BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B01LP1|AL429160
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig689 1734 0.0
3x_Contig1173 173 7e-43
>3x_Contig689
Length = 3037
Score = 1734 bits (873), Expect = 0.0
Identities = 914/924 (98%), Gaps = 4/924 (0%)
Strand = Plus / Minus
Query: 62 atagagtaacttcaaagctagccgagaaataccattggaaaggtattaaacaaacagtaa 121
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 3029 atagagtaacttcaaagctagccgagaaataccattggaaaggttttagacaaacagtaa 2970
Query: 122 tacaagttatcaactcatgttcgaactgccaagaaaacacaaataggatgtctgatgaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 tacaagttatcaactcatgttcgaactgccaagaaaacacaaataggatgtctgatgaaa 2910
Query: 182 gcgttgtt-attgacacaagaaccgatcccaatggccaaccgcacacaattgttcatgca 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 gcgttgtttattgacacaagaaccgatcccaatggccaaccgcacacaattgttcatgca 2850
Query: 241 gttccacaaggtcatatatctganagtttggagacattagaagaattgacaccggcggac 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2849 gttccacaaggtcatatatctgaaagtttggagacattagaagaattgacaccggcggac 2790
Query: 301 tccaccaataaatctcggttgaaaacatcatttgttcaaaggattaaatttggcaaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 tccaccaataaatctcggttgaaaacatcatttgttcaaaggattaaatttggcaaagat 2730
Query: 361 ccgggctctgagagtgtcaaaagaaagctggtcacgagctcagatgactcgatgaattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2729 ccgggctctgagagtgtcaaaagaaagctggtcacgagctcagatgactcgatgaattct 2670
Query: 421 ttttctaactatgctaatgaaggtatcaagagcagcagtaggaagaagtcgagaagtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2669 ttttctaactatgctaatgaaggtatcaagagcagcagtaggaagaagtcgagaagtggt 2610
Query: 481 gatccaagaggcagcgaaccagggactgtcatattggaagaagagacaccaaatagcatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2609 gatccaagaggcagcgaaccagggactgtcatattggaagaagagacaccaaatagcatg 2550
Query: 541 gtggatgacgcgttactaaacctagaagataacgtgatggccgcagtagaggcagttcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2549 gtggatgacgcgttactaaacctagaagataacgtgatggccgcagtagaggcagttcgg 2490
Query: 601 aatgagcagcaacaaaaatcaagtccaggtagtgataatatcaacgggaacagtaaggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2489 aatgagcagcaacaaaaatcaagtccaggtagtgataatatcaacgggaacagtaaggat 2430
Query: 661 cctcctcatggtggcccaaaaaatcatggaactcgtatttcctcggaaggaatcaacaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2429 cctcctcatggtggcccaaaaaatcatggaactcgtatttcctcggaaggaatcaacaga 2370
Query: 721 caggcctattattaatgtccaatagacaatgtatgtractatattcaaattatttataga 780
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2369 caggcctattattaatgtccaatagacaatgtatgtaactatattcaaattatttataga 2310
Query: 781 tctctcttaacgacgtcgaaaacaacggaattgtcactaactataacatct-ctcttata 839
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2309 tctctcttaacgacgtcgaaaacaacggaattgtcactaactataacatctactcttata 2250
Query: 840 atgttcctttattgggaattcgctgacaactctcacattatgaacagaatcaccgctacc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2249 atgttcctttattgggaattcgctgacaactctcacattatgaacagaatcaccgctacc 2190
Query: 900 atggktcccggacggtgagagagtgaattcggatgatccaatttgcgatccctgaa-ggc 958
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2189 atggttcccggacggtgagagagtgaattcggatgatccaatttgcgatccctgaagggc 2130
Query: 959 attgataa-catatgcggggttga 981
|||||||| ||||||||| |||||
Sbjct: 2129 attgataaccatatgcggagttga 2106
>3x_Contig1173
Length = 7454
Score = 173 bits (87), Expect = 7e-43
Identities = 238/289 (82%)
Strand = Plus / Minus
Query: 1 gatccacaacgacagtgangaattgcatatgaaactcacatggttgaccatcagggaatt 60
|||||||||||||||| ||||||||||||||| | | |||||||| ||| ||||||||
Sbjct: 309 gatccacaacgacagttgagaattgcatatgaaattgagatggttgaacatgagggaatt 250
Query: 61 aatagagtaacttcaaagctagccgagaaataccattggaaaggtattaaacaaacagta 120
|||||||||| || |||| ||| |||||||| ||||||||||||||||| ||| ||||
Sbjct: 249 aatagagtaagttaaaaggtaggagagaaatagaattggaaaggtattaaataaagagta 190
Query: 121 atacaagttatcaactcatgttcgaactgccaagaaaacacaaataggatgtctgatgaa 180
||| ||||||| || | ||||| ||| || ||||||| | ||||||||||| |||||||
Sbjct: 189 atagaagttatgaattgatgttggaaatgataagaaaaaagaaataggatgtatgatgaa 130
Query: 181 agcgttgttattgacacaagaaccgatcccaatggccaaccgcacacaattgttcatgca 240
|| ||||||||||| ||||||| ||| ||||| || | | | ||||||| ||| |
Sbjct: 129 agtgttgttattgaaacaagaattgataataatgggaaatagaaaataattgttaatgaa 70
Query: 241 gttccacaaggtcatatatctganagtttggagacattagaagaattga 289
||| | ||||| |||||| ||| |||||||||| ||||||||||||||
Sbjct: 69 gtttgaaaaggtaatatatatgaaagtttggagatattagaagaattga 21
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6561
Number of Sequences: 1807
Number of extensions: 6561
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)